PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107511.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 553aa    MW: 62194.6 Da    PI: 9.9638
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107511.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.72.3e-07454501448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E  +lvd++ ++G g+W+ I r +      Rt+ +++++w+++l
   XP_010107511.1 454 WTISEVTKLVDGISEYGVGRWTDIKRLLFassAYRTPIDLRDKWRNLL 501
                      ********************************99************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.6446505IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-10446504IPR009057Homeodomain-like
SMARTSM007179.9E-7450503IPR001005SANT/Myb domain
CDDcd116602.04E-16452502No hitNo description
SuperFamilySSF466894.56E-15452514IPR009057Homeodomain-like
PfamPF139216.6E-5454509No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MFSFPFPTPF FCAPLIRFRF LALPRLFAFG HSPEFLSPRV LYPLSDRRVR SSLGLFLLID  60
SGSILKTPHE MDNEAHSRKK FANMKHQRVK AEESFAPTIE DEAIQHLLAE PKIDSVSVDG  120
MLHLGQENGV KCSGLEDFSC GYEFFFNTYR GGLDSNTAQG GEDELELGVL DGLLDEVEEV  180
GDLHAADGLA SPCEDFLLEF GFAGKAFGLD YGPRGGSHSR NASAESRSPG LSGSSNSAVG  240
LSESSSVTIQ ESECKNDSLK KTETELRGTF RHKKKRKTQV KGSMCPASHD LQTPNQLDDD  300
DDPLLSSMLV NKHEKKSGEA IKVGGSRREK RLRRPTQRYI EEFSDKKSKH LKGGKFTSVD  360
VAGIKDRRLK VRSHAELSSI GVGTLSSVPE EELPNGNKTQ VLPEIRRGRG RPKKQAPIVP  420
PKLNEELLTS DSDEGRVIRK RSDKHDRRKH QRMWTISEVT KLVDGISEYG VGRWTDIKRL  480
LFASSAYRTP IDLRDKWRNL LRASSLQKIK KREVEDKQSH ALRPLPKFLI RRVRELAKIH  540
PYPRERGQKR IGQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107511.10.0Telomere repeat-binding protein 4
TrEMBLW9S5270.0W9S527_9R
STRINGVIT_08s0040g01640.t011e-131(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47162639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.12e-20TRF-like 6